Major spoilers through manga File 1166, including Volume 108, plus the movies The Darkest Nightmare and Black Iron Submarine. The manga classifications below use that point in the story; the movie cases are listed separately.
The clearest confirmed group is Conan Edogawa, Hiroshi Agasa, Vermouth, and Pisco. Shuichi Akai’s knowledge is strongly supported by his history and behavior, but the way it is established differs from an explicit disclosure. Pisco has died, so this is not a list of four living confidants.
The harder cases depend on what “knowing” means. Recognizing that Haibara is unusually knowledgeable, knowing an adult woman’s face, and understanding that Ai Haibara is the former Organization scientist Sherry are not the same discovery.
Who knows—and how much?

In the main manga, the clearest core group who know that Ai Haibara is Shiho Miyano or Sherry, together with the truth of her de-aging, consists of Conan Edogawa, Hiroshi Agasa, Vermouth, and Pisco.
Shuichi Akai also appears to understand her identity when his history with Akemi Miyano and his conduct as Subaru Okiya are considered together. Unlike Conan and Agasa, however, he has no equally explicit scene in which Ai tells him every part of the secret, so he belongs in a separate, strongly implied category.
Rumi Wakasa, Tooru Amuro, and Rum have moved dangerously close to the secret, but the main manga has not shown a complete identity reveal to any of them. Keeping these categories separate is the only way to answer who knows what without turning suspicion into certainty.
| Level of knowledge | Characters | Important limit |
|---|---|---|
| Clearly established core | Conan, Agasa, Vermouth, Pisco | They connect the child with her concealed identity; Pisco dies before broadly sharing it. |
| Strongly supported by the story | Shuichi Akai | His relationship with Akemi and his protection of Haibara provide converging evidence. |
| Partial knowledge or strong indications | Yusaku and Yukiko Kudo, Heiji Hattori, Masumi Sera, Kaito Kid | The extent of each person’s information differs; a complete briefing is not established for all. |
| Close to the secret, without a complete reveal through File 1166 | Rumi Wakasa, Tooru Amuro, Rum | Relevant clues and suspicions do not establish the full connection. |
There are three separate pieces of information to track: her real name, Shiho Miyano; her Organization codename, Sherry; and the fact that APTX 4869 changed her body into a child’s. Someone can possess one piece without demonstrably possessing all three.
That is why a simple head count becomes misleading. A character who knows her adult appearance may still lack her history, while another may understand the drug’s effects without having been told every name she has used.

The confirmed core and the evidence for Akai

Conan and Agasa hear the truth from her
Haibara tells Conan about her connection to the Organization and the drug that also changed him. The apparently ordinary new pupil becomes someone who understands both his condition and the danger behind it.
Agasa finds her after her escape and gives her a home. His knowledge makes practical protection possible: she can live under a new name while continuing to work on the problem of the drug.
These two relationships play different roles. Conan shares her unusual condition and much of the danger; Agasa gives her a stable place to return to. The same secret creates both a partnership and a kind of family.
Vermouth identifies the child as Sherry
Vermouth’s investigation, including her disguise as Dr. Araide, brings her to Haibara. Her attempt to kill Sherry during the Full Moon confrontation makes the recognition explicit.
Her knowledge does not become a general briefing to the Organization. That restraint must not be mistaken for uncomplicated affection toward Haibara: Vermouth has targeted her while treating Conan and Ran as personal exceptions.
This leaves a dangerous situation. Someone inside the Organization knows the truth, yet the wider group does not automatically possess everything she knows.
Pisco recognizes a face from childhood
Pisco knew Shiho’s parents and remembered Shiho as a child. In the reunion with the Black Organization, that history lets him recognize her younger appearance rather than accepting it as a disguise.
The scene exposes a weakness in Haibara’s protection. A changed age can deceive people who know only the adult Sherry, but it is less secure against someone who remembers her earlier face.
Gin kills Pisco before the information is widely shared. Haibara escapes the immediate consequence, but the method of recognition remains frighteningly simple: her younger body is still part of a life someone else may remember.

Why Akai belongs in a strongly supported category
Akai knew Akemi while infiltrating the Organization as Dai Moroboshi. That relationship gives him a personal connection to Shiho’s family, beyond what an investigator might learn from an ordinary case file.
As Subaru Okiya, he remains nearby and protects Haibara. His actions, his history with Akemi, and his part in the Organization cases point in the same direction.
The distinction from Conan and Agasa is about the evidence shown to us, not a claim that Akai is probably ignorant. His knowledge is strongly supported even without an equivalent scene in which Haibara explains every part of her life to him.
His restraint also matters emotionally. He protects her without insisting on an immediate closeness that she may not be ready to accept.
People who know part of the secret

Yusaku, Yukiko, and Heiji
Yukiko participates in the Mystery Train plan involving Vermouth and Sherry. Yusaku helps Conan confront the Organization, while Heiji is involved with Conan’s temporary returns to his older body and the circumstances surrounding the antidote.
Those connections make complete ignorance implausible. They do not establish that all three have been given an identical explanation of Haibara’s name, codename, research, and history.
Information could have been shared outside the scenes we see, but an unseen conversation should not be treated as a documented one. Their involvement is firmer than any claim to know the precise contents of every briefing.
Masumi Sera and Kaito Kid
Masumi’s interest is shaped by her mother Mary’s younger body. Haibara may hold a clue to a way of reversing that condition. Suspicion about her knowledge of the drug is not the same as identifying her as Shiho Miyano and Sherry.
Kid takes the appearance of the adult Shiho during Conan’s Mystery Train plan. That establishes his involvement with her adult image. It does not establish that Conan explains the full science of APTX 4869 or the Organization’s entire interest in her.
Knowing enough to play a role can be very different from knowing why every part of the plan is necessary. Kid’s skill at performing the disguise should not be used to fill in an unseen briefing.
The FBI beyond Akai
Jodie Starling, Andre Camel, and James Black are involved in protecting people threatened by the Organization. That does not prove each has exactly the same information about Haibara that Akai has.
Akai’s personal connection to Akemi is an additional source of knowledge. It should not automatically be attributed to every FBI colleague. Protection and complete disclosure are separate decisions.
Rum, Wakasa, and Amuro through File 1166

Rum sees Haibara, but recognition is not confirmed
Volume 108 places Rum, as Wakita, close to Haibara. She feels the danger of the Organization around him, and he has an opportunity to see her.
The unsettling proximity is not the same as Pisco’s or Vermouth’s explicit recognition. The evidence discussed here does not establish that Rum has completed the connection from the child to Shiho and Sherry.
His knowledge of the Miyano family and the drug could make later deductions dangerous. That possibility explains the tension without turning a potential discovery into one that has already happened.
Wakasa’s suspicion carries a personal dimension
Wakasa reacts to Haibara in ways that connect her with the Miyano family, including a resemblance to the young Akemi. Haibara’s knowledge and words give Wakasa further reasons to investigate.
Files 1163–1166 also give the relationship an emotional dimension. Haibara is increasingly more than a clue to be examined; her behavior affects Wakasa personally.
Wakasa may have inferred a great deal, but through File 1166 the complete identity is not explicitly stated by her. Strong suspicion and full disclosure remain distinct.
Amuro knows the Miyano family, but the missing link matters
As a child, Rei knew Elena Miyano. As Bourbon, he pursues Sherry during the Mystery Train operation. Those two connections make the question of what he knows especially important.
However, the adult Shiho he encounters in that operation is Kid in disguise. Familiarity with Elena and participation in the operation do not, on their own, show that he has connected the child Ai Haibara with Elena’s daughter.
The manga evidence within this article’s scope does not establish that completed discovery. The movie version of his access to information needs a separate account.

Movie cases: recognition, suspicion, and information that does not spread

The following events belong to the films. They should not be added to the manga’s confirmed total.
| Character | Movie | What the film establishes or leaves open |
|---|---|---|
| Curaçao | The Darkest Nightmare | Recognizes Sherry after recovering her memory; chooses to protect the children and dies without broadly exposing Haibara. |
| Naomi Argento | Black Iron Submarine | The age-recognition result, childhood memories, and interaction with Haibara bring her to the connection with Shiho. |
| Pinga | Black Iron Submarine | Approaches the secrets through the system; his final certainty about Haibara after Vermouth’s interference is not fully stated. |
| Bourbon, Kir, and Gin | Black Iron Submarine | Encounter the system’s identification, whose reliability is subsequently undermined. |
Curaçao and Naomi show why being recognized does not always produce betrayal. Memories of the children or of Shiho’s kindness can lead the person who discovers the truth toward protection.
The age-recognition system creates a different danger: information can travel beyond the person who first notices a resemblance. Vermouth’s use of Shiho’s appearance to undermine the system’s results prevents a temporary identification from becoming straightforward, lasting certainty for the Organization.
That outcome does not mean everyone receives a complete explanation of what really happened. The distinctions between seeing a result, trusting it, and retaining that belief are essential to understanding the film.
Why exposure would endanger more than Haibara

If the Organization established that Shiho survived in a child’s body, it would gain evidence that APTX 4869 can produce an outcome other than death. That could prompt new scrutiny of other people presumed dead, including Shinichi.
Agasa’s protection, Okiya’s presence near her, and the people repeatedly helping her could also attract attention. Exposure would begin with Haibara but might expand into the network keeping both her and Conan safe.
As a scientist connected to the drug, she faces more than one possible danger. Someone could want her dead as a traitor, or alive for what she knows and could be made to do.
That is why the most useful question is not simply how many people know. It is who knows which part, what they intend to do with it, and whether the information will reach someone else. The same recognition that brings Haibara safety with Agasa becomes a threat in the hands of Pisco.

Further reading (contains spoilers): Ai Haibara's age and birthday and Haibara and Akai's family connection.

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